Curated Information
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Home > Curated Information Page > PubMed Id: 18655026
Tan F, et al. (2008) Proteomic analysis of ubiquitinated proteins in normal hepatocyte cell line Chang liver cells. Proteomics 8, 2885-96 18655026
This page summarizes selected information from the record referenced above and curated into PhosphoSitePlus®, a comprehensive online resource for the study of protein post-translational modifications (NAR, 2015, 43:D512-20). To learn more about the scope of PhosphoSitePlus®, click here.
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K637-ub - CCAR1 (human)
Modsite: HWsKLDPkTMKVNDL SwissProt Entrez-Gene
Orthologous residues
CCAR1 (human): K637‑ub, CCAR1 iso2 (human): K622‑ub, CCAR1 (mouse): K634‑ub, CCAR1 (rat): K634‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K955-ub - CCDC144A (human)
Modsite: VRLHDKMkVDMSGLQ SwissProt Entrez-Gene
Orthologous residues
CCDC144A (human): K955‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K89-ub - CDK1 (human)
Modsite: FLSMDLKkYLDSIPP SwissProt Entrez-Gene
Orthologous residues
CDK1 (human): K89‑ub, CDK1 iso2 (human): K89‑ub, CDK1 (mouse): K89‑ub, CDK1 (rat): K89‑ub, CDK1 (chicken): K89‑ub, CDK1 (fruit fly): K89‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K774-ub - GPR158 (human)
Modsite: RQCSKEDkEGADHGT SwissProt Entrez-Gene
Orthologous residues
GPR158 (human): K774‑ub, GPR158 (mouse): K774‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K44-ub - HDAC3 (human)
Modsite: LHYGLYKkMIVFKPY SwissProt Entrez-Gene
Orthologous residues
HDAC3 (human): K44‑ub, HDAC3 iso2 (human): K45‑ub, HDAC3 (mouse): K44‑ub, HDAC3 (rat): K44‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K112-ub - HMGB1 (human)
Modsite: FCsEyRPkIkGEHPG SwissProt Entrez-Gene
Orthologous residues
HMGB1 (human): K112‑ub, HMGB1 (mouse): K112‑ub, HMGB1 (rat): K112‑ub, HMGB1 (cow): K112‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K422-ub - hnRNP K (human)
Modsite: HEsGAsIkIDEPLEG SwissProt Entrez-Gene
Orthologous residues
hnRNP K (human): K422‑ub, hnRNP K iso2 (human): K422‑ub, hnRNP K iso3 (human): K398‑ub, hnRNP K (mouse): K422‑ub, hnRNP K iso2 (mouse): K422‑ub, hnRNP K iso3 (mouse): K398‑ub, hnRNP K iso4 (mouse): K398‑ub, hnRNP K (rat): K422‑ub, hnRNP K (cow): K422‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K32-ub - KLF4 (human)
Modsite: SGPAGREkTLRQAGA SwissProt Entrez-Gene
Orthologous residues
KLF4 (human): K32‑ub, KLF4 (mouse): K32‑ub, KLF4 (rat): K32‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K785-ub - Kv10.2 (human)
Modsite: NRDAMELkPNGGADQ SwissProt Entrez-Gene
Orthologous residues
Kv10.2 (human): K785‑ub, Kv10.2 (mouse): K785‑ub, Kv10.2 (rat): K785‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K422-ub - LIG1 (human)
Modsite: TGSASTAkKIDIIkG SwissProt Entrez-Gene
Orthologous residues
LIG1 (human): K422‑ub, LIG1 (mouse): K420‑ub, LIG1 iso3 (mouse): K436‑ub, LIG1 (rat): K422‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K170-ub - MACROD2 (human)
Modsite: NCYKSSLkLVKENNI SwissProt Entrez-Gene
Orthologous residues
MACROD2 (human): K170‑ub, MACROD2 iso1 (human): K170‑ub, MACROD2 (mouse): K170‑ub, MACROD2 iso2 (mouse):
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K585-ub - RBM26 (human)
Modsite: ATYEEAKkAISStEA SwissProt Entrez-Gene
Orthologous residues
RBM26 (human): K585‑ub, RBM26 iso2 (human): K585‑ub, RBM26 iso3 (human): K585‑ub, RBM26 (mouse): K590‑ub, RBM26 (rat): K590‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K911-ub - SALL2 (human)
Modsite: PGESSSRkACEVCGQ SwissProt Entrez-Gene
Orthologous residues
SALL2 (human): K911‑ub, SALL2 iso3 (human): , SALL2 (mouse): K908‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K58-ub - TCEA2 (human)
Modsite: MsVNALRkQSSDEEV SwissProt Entrez-Gene
Orthologous residues
TCEA2 (human): K58‑ub, TCEA2 (mouse): K57‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K190-ub - TR-alpha (human)
Modsite: SHWKQRRkFLPDDIG SwissProt Entrez-Gene
Orthologous residues
TR‑alpha (human): K190‑ub, TR‑alpha iso2 (human): K190‑ub, TR‑alpha (mouse): K190‑ub, TR‑alpha iso2 (mouse): K190‑ub, TR‑alpha iso3 (mouse): K190‑ub, TR‑alpha iso5 (mouse): K190‑ub, TR‑alpha (rat): K190‑ub, TR‑alpha iso2 (rat): K190‑ub, TR‑alpha (chicken): K188‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K11-ub - ubiquitin (human)
Modsite: FVktLTGktItLEVE SwissProt
Orthologous residues
ubiquitin (human): K11‑ub, ubiquitin (mouse): K11‑ub, ubiquitin (rat): K11‑ub, ubiquitin (cow): K11‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K29-ub - ubiquitin (human)
Modsite: tIENVkAkIQDkEGI SwissProt
Orthologous residues
ubiquitin (human): K29‑ub, ubiquitin (mouse): K29‑ub, ubiquitin (rat): K29‑ub, ubiquitin (cow): K29‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human

K48-ub - ubiquitin (human)
Modsite: QRLIFAGkQLEDGRT SwissProt
Orthologous residues
ubiquitin (human): K48‑ub, ubiquitin (mouse): K48‑ub, ubiquitin (rat): K48‑ub, ubiquitin (cow): K48‑ub
Characterization
Methods used to characterize site in vivo mass spectrometry
Relevant cell lines - cell types - tissues:  Chang liver (cervical)
Cellular systems studied:  cell lines
Species studied:  human